First-Year Rotations (2022-2023)
Autumn: Benjamin Freedman, PhD
Winter: Cory Simpson, MD, PhD
Spring: Neel Dey, MD
Autumn: Benjamin Freedman, PhD
Winter: Cory Simpson, MD, PhD
Spring: Neel Dey, MD
Immuno-oncology, T-cell immunology
Autumn: William Grady, MD
Winter: Edus “Hootie” Warren, MD, PhD
Spring: Evan Newell, PhD
T cell immunology, gamma delta T cells, host responses to mycobacterial infection
Tappen T, Layton E, Maerz M, Bishop E, Scriba TJ, Seshadri C. ”Molecular requirements for αβ and γδ T cell receptor recognition of mycobacterial phosphomycoketide” PacTB Conference; 2023 April; Berkeley, CA. Invited oral presentation.
Honaker Y, Hubbard N, Xiang Y, Fisher L, Hagin D, Sommer K, Song Y, Jung Yang S, Lopez C, Tappen T, Dam E, Khan I, Hale M, Buckner J, Scharenberg A, Torgerson T, Rawlings D. Gene Editing to Induce FOXP3 Expression in Human CD4 + T Cells Leads to a Stable Regulatory Phenotype and Function. Science Translational Medicine Vol 12.; 2020
Yang S, Singh A, Drow T, Tappen T, Honaker Y, Barahmand-Pour-Whitman F, Linsley P, Cerosaletti K, Mauk K, Xiang Y, Smith J, Mortensen E, Cook P, Sommer K, Khan I, Liggitt D, Rawlings D, Buckner J. Pancreatic Islet-Specific Engineered T Regs Exhibit Robust Antigen-Specific and Bystander Immune Suppression in Type 1 Diabetes Models. Science Translational Medicine Vol 14.; 2022.
Treasurer of Husky Science Communication Initiative (HuSCI)
Autumn: Thomas R. Hawn, MD, PhD
Winter: Martin Prlic, PhD
Spring: Chetan Seshadri, MD
Vaccine development, antibody technologies, gene editing, autoimmunity
Verma S, Dufort MJ, Olsen TM, Labuda JC, Kimmel S, Scharffenberger S, et al. Antigen-level resolution of commensal-specific B cell responses enabled by phage-display screening and B cell tetramers. bioRxiv. 2023:2023.10.13.562275.
Christian ML, Dapp MJ, Scharffenberger SC, Jones H, Song C, Frenkel LM, Krumm A, Mullins JI, Rawlings DJ. CRISPR/Cas9-Mediated Insertion of HIV Long Terminal Repeat within BACH2 Promotes Expansion of T Regulatory-like Cells. J Immunol. 2022 Apr 1;208(7):1700-1710. doi: 10.4049/jimmunol.2100491. Epub 2022 Mar 9. PMID: 35264460; PMCID: PMC8976747.
Yuchi Honaker, Karen Sommer, Noelle Dahl, Yufei Xiang, Christina Lopez, Samuel Scharffenberger, Michelle Christian, Troy R. Torgerson, Andrew M. Scharenberg, David J. Rawlings; Enabling Gene-Edited, Regulatory-like, T Cells (edTreg) for Treatment of IPEX and Other Autoimmune Disorders. Blood 2019; 134 (Supplement_1): 2071.
Autumn: Andrew McGuire, PhD
Winter: Roland Walter, MD, PhD, MS
Spring: Aude Chapuis, MD
Gut Microbiome, Community Interactions, role of gut microbiome/metabolome implications in human health
Director of Husky Science Communication Initiative (HuSCI) https://husciorg.wixsite.com/husci
Autumn: Thomas Reh, PhD
Winter: Manu Setty, PhD
Spring: Andrew Stergachis, MD, PhD
Gene Therapy
Gottimukkala, K.S.V., Lane, D.D., Cunningham, R.A., Jwa, Y., Adair, J.E. Development of gold nanoparticles for in vivo CRISPR delivery: improving nuclease loading and stability with pre- formed RNP complexes – Oral Presentation at American Society of Gene and Cell Therapy – May 2023 – Los Angeles.
Shahbazi, R., Lane, D.D., Lipson, P., Gottimmukkala, K.S.V., Cunningham, R., Adair, J.E. Hematopoietic stem and progenitor cell specific antibodies and intraosseous administration enhance delivery of a CRISPR nanoformulation – American Society of Gene and Cell Therapy – May 2023 – Los Angeles.
Cassidy, M.E.*, Gottimukkala, K.S.V.*, Lane, D.D., Jwa, Y., Adair, J.E. Human 𝛃-2-microglobulin (B2M) knockdown as an in vitro model to evaluate CRISPR delivery. [In preparation, abstract presentation at 2023 annual meeting of the American Society of Gene and Cell Therapy. *Co- first authors, May 2023 – American Society of Gene and Cell Therapy – May 2023 – Los Angeles.
Shahbazi, R., Lipson, P., Gottimukkala, K.S.V., Lane, D.D., Adair, J.E. (2023). CRISPR Gene Editing of Hematopoietic Stem and Progenitor Cells. In: Pelus, L.M., Hoggatt, J. (eds) Hematopoietic Stem Cells. Methods in Molecular Biology, vol 2567. Humana, New York, NY.
Autumn: Edus “Hootie” Warren, MD, PhD
Winter: Suzie Pun, PhD
Spring: Jennifer Adair, PhD
Karthikeya Gottimukkala and Adair Lab members at ASGCT 26th Annual meeting in Los Angeles – May 2023.
Autumn: Michael Haffner, MD, PhD
Winter: Scott Furlan, MD
Spring: Steven Henikoff, PhD
Autumn: Harmit Malik, PhD
Winter: Kelly Lee, PhD
Spring: Kelly Lee, PhD
Thesis Project title: The consequences of mutator-driven mutagenesis and analysis of life span extending interventions using outgrowth analysis and replicative life span in Saccharomyces cerevisiae
I use budding yeast to model mutator phenotypes and investigate how mutator-driven mutagenesis limits fitness and replicative life span. Using a yeast outgrowth assay I developed to identify and characterize inhibitors of mTOR signaling, I am also identifying life span extending compounds that can be used to increase healthy human and companion pet life span.
HHMI Gilliam Fellowship for Advanced Study
Pacific Science Center Science Communication Fellowship
Cell and Molecular Biology Training Grant
GO-MAP Bank of America Fellowship
GO-MAP President’s Graduate Scholar Award
Honorable mention, NSF Graduate Research Fellowship
WWU Research and Sponsored Programs Graduate Grant
WWU Biology Alumni Student Research Fellowship
WWU Declan Barron Memorial Scholarship
WWU Philosophy Department Undergraduate Fellowship
All Nations Louis Stokes Alliance for Minority Participation (ANLSAMP) Fellowship
Lee, M.B., Carr, D., Kiflezghi, M., Zhao, Y., Kim, D., Thon, S., Moore, M., Li, M., Kaeberlein, M. A system to identify inhibitors of mTOR signaling using high-resolution growth analysis in Saccharomyces cerevisiae, GeroScience (2017) https://doi.org/10.1007/s11357-017-9988-4